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SIO 296 - Readings in Genomics I: Genome Analysis Principles and Datasets

Dr. Terry Gaasterland
Tuesdays 3 pm to 6 pm
Hubbs Hall 3300
4 credits

The course will focus on three areas. The first is an introduction to commonly used bioinformatics tools with a focus on understanding how they work and how to use them strategically. Second, students will practice using tools to become familiar with their strengths and limitations. The third area will be to consider tools in the context of real data. This year's special topic will be the International HapMap Project as an example of intraspecies genomic polymorphism.

Assignments

Lecture Slides

Links

Papers

Required Textbooks
Bioinformatics and Functional Genomics by Jonathan Pevsner
Genome by Matt Ridley

Recommended Textbooks
BLAST by Ian Korf, et al
Learning the UNIX Operating System, Fifth Edition by Jerry Peek, et al

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